Force Sequential Output with SCP?

November 9th, 2024
tech
In my bioinformatics work I often stream files between linux hosts and Amazon S3. This could look like:

$ scp host:/path/to/file /dev/stdout | \
    aws s3 cp - s3://bucket/path/to/file

This recently stopped working after upgrading:

ftruncate "/dev/stdout": Invalid argument
Couldn't write to "/dev/stdout": Illegal seek

I think I figured out why this is happening:

With scp I can give the -O flag:

Use the legacy SCP protocol for file transfers instead of the SFTP protocol. Forcing the use of the SCP protocol may be necessary for servers that do not implement SFTP, for backwards-compatibility for particular filename wildcard patterns and for expanding paths with a '~' prefix for older SFTP servers.

This does work, but it doesn't seem ideal: probably servers will drop support for the SCP protocol at some point? I've filed a bug with OpenSSH.


[1] "man scp" gives me: "Since OpenSSH 8.8 (8.7 in Red Hat/Fedora builds), scp has used the SFTP protocol for transfers by default."

Comment via: facebook, lesswrong, mastodon, substack

Recent posts on blogs I like:

Tuberculosis Considered As Dating Strategy

Against some evopsych

via Thing of Things July 8, 2025

Retrospective on life tracking and effectiveness systems

I’ve been doing life tracking for around 10 years, and this post is looking back at some things I learned from the data (since my previous retrospective in 2017). Highlights include what I get out of the Oura ring, correlations between sleep and deep work…

via Victoria Krakovna July 4, 2025

Elixir's Last Dance

On May 18th, the contra dance band Elixir had their last gig ever. The dance was packed: there were three hundred people. It was the only dance BIDA has ever done where they sold tickets. People flew from across the country just to hear Elixir play one la…

via Lily Wise's Blog Posts June 5, 2025

more     (via openring)